Index

A

addAtom() (titsite.Titsite method)

addChargeSets() (titsite.Titsite method) addReferenceTautomer() (titsite.Titsite method)

C

calc_interaction_between() (titsite.Titsite method) calcBackEnergy() (tautomer.Tautomer method) calcInteractionWith() (tautomer.Tautomer method) calcpKint() (pypka.Titration method) (tautomer.Tautomer method)

CalcPotentialTautomer() (tautomer.Tautomer method) CalcPotentialTitratingMolecule() (tautomer.Tautomer method) calcSiteInteractionsParallel() (pypka.Titration method)

G

getArrayPosition() (molecule.Molecule method) getAtomsList() (molecule.Molecule method) getAverageProt() (Titration method) (titsite.Titsite method) getNAtoms() (molecule.Molecule method) getParameters() (pypka.Titration static method) (Titration method)

getProtState() (titsite.Titsite method) getProtStategetProtState() (Titration method) getTautNAtoms() (molecule.Molecule method) getTautomerInstance() (molecule.Molecule method) getTautomers() (titsite.Titsite method) getTitrableSites() (built-in function)

I

iterAllSitesTautomers() (pypka.Titration method)

iterAtoms() (molecule.Molecule method) iterNonRefSitesTautomers() (molecule.Molecule method)

L

loadChargeSet() (tautomer.Tautomer method)

M

Molecule (class in molecule)

P

printAllSites() (molecule.Molecule method)

printAllTautomers() (molecule.Molecule method)

S

setDetailsFromTautomer() (tautomer.Tautomer method)

setDetailsFromWholeMolecule() (tautomer.Tautomer method) setTautomers() (titsite.Titsite method)

T

Tautomer (class in tautomer) Titration (built-in class) (class in pypka)

Titsite (class in titsite)